EGAF00005318285 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318285
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3316549
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	13374	0.40325048717808787	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12490	0.3765962752246386	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10200	0.30754859946287544	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8728	0.26316511530509573	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5890	0.17759424027807216	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	3946	0.11897909543926533	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3793	0.1143658664473222	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3580	0.10794352804677391	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3521	0.10616457046164551	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6355	54.257374	9
TACGGCC	785	53.280125	7
TCTACGG	810	52.476074	5
GTCTACG	835	51.308292	4
CGCGGTG	6815	50.844578	10
CCGAACT	880	50.70482	67
TGGCGCG	6900	49.620842	15
GCCGGTT	965	45.8057	3
CGGTTCA	970	45.573036	5
GTAGTCC	7685	44.984623	27
TGTAGTC	7750	44.962006	26
CTACTCG	7730	44.891884	37
CTACGGC	940	44.857	6
TACTCGG	7755	44.707485	38
GTCGTAC	175	44.68824	3
CGGCATA	185	44.497974	1
TAGTCCC	7795	44.43377	28
GTTGATC	1035	44.35369	10
CGGGTAG	470	43.7879	1
CCTGTAG	7920	43.680344	24