FastQCFastQC Report
Fri 10 May 2024
EGAF00005318297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005318297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2607531
Total Bases194.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT73650.2824511002937261No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN66450.25483877277010325No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG32590.12498413249928764No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)