EGAF00005318297 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318297
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2607531
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6645	0.25483877277010325	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3789	0.1453098735930656	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3199	0.12268310520565238	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	2778	0.10653756369531178	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	735	54.707867	4
TCTACGG	740	54.33822	5
CTACGGC	795	50.57897	6
TACGGCC	795	50.578003	7
CGGTATA	250	45.61098	1
TGGCGCG	1935	45.110638	15
GCGCGGT	1955	44.473362	9
CGGCATA	210	44.426285	1
GCGTACT	170	40.651505	1
CGGTACT	230	40.563126	1
GCCGGTT	450	40.47759	3
ACGGCCA	1015	39.613758	8
GAACGCG	1010	39.599792	24
CCGAACT	460	38.73859	67
CGTACTT	125	38.50004	2
CGGCCAT	1060	37.93204	9
CTACTCG	2320	37.70748	37
CGCGGTG	2315	37.705868	10
AGGATCG	2190	37.485847	59
TACTCGG	2350	37.399254	38