EGAF00005318303 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318303
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3328998
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9951	0.29891877375714854	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8052	0.24187458208145513	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6615	0.19870844019732065	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4123	0.12385108071557868	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3888	0.11679189954454765	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3935	50.447796	9
TGGCGCG	4235	47.11192	15
CCGAACT	795	44.470768	67
CGCGGTG	4520	44.0711	10
GCCGGTT	800	42.2132	3
CGGTTCA	835	41.271027	5
CTACTCG	4940	40.6477	37
TACTCGG	4955	40.4712	38
GTAGTCC	4980	40.31584	27
TAGTCCC	4990	40.175495	28
GGGGACT	3325	39.589214	1
TGTAGTC	5100	39.417747	26
GGGGTAG	1435	39.347816	1
CCGGTTC	880	38.769558	4
CGGTAAG	280	38.352055	1
CCTGTAG	5270	38.25538	24
GGGGTAC	960	38.248955	1
ACTCGGG	5295	38.085777	39
TCTGGTC	2875	37.161076	10
CGAACTT	965	36.99189	68