EGAF00005318309 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318309
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3325021
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9317	0.28020875657627425	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7680	0.23097598481332898	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6300	0.18947248754218393	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4086	0.12288644192021644	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3882	0.11675114232361239	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3845	50.542366	9
TGGCGCG	4115	46.967815	15
CCGAACT	785	46.459892	67
CGCGGTG	4380	44.447475	10
GCCGGTT	865	41.817776	3
GTACGCA	680	40.713066	65
GGGGACT	3595	40.500538	1
CTACTCG	4815	40.30124	37
TCTGGTC	2995	40.266514	10
TACTCGG	4845	39.995934	38
GTAGTCC	4895	39.570095	27
ACTCTTC	3115	39.158955	5
GTTGATC	990	38.981236	10
TAGTCCC	5065	38.45519	28
CGAACTT	1005	38.41351	68
TGTAGTC	5075	38.147045	26
GGGACTC	3610	37.89332	2
ACTCGGG	5165	37.871914	39
CCGGTTC	965	37.12733	4
CCTGTAG	5175	36.997517	24