EGAF00005318313 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318313
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3250328
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10207	0.3140298456032745	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	9847	0.30295404033069895	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8927	0.2746492046341169	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8080	0.2485902961178072	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4185	0.12875623629369098	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4795	53.21439	9
TGGCGCG	4995	50.258312	15
CCGAACT	855	48.37202	67
CGCGGTG	5380	47.55297	10
GCCGGTT	895	45.724728	3
CGAACTT	965	43.288628	68
CTACTCG	5930	42.923256	37
TACTCGG	5960	42.905388	38
CGGTTCA	975	41.618958	5
GTAGTCC	6175	41.553986	27
TACGGCC	325	41.266254	7
TGTAGTC	6250	41.1531	26
TAGTCCC	6255	41.03715	28
CGTGCCT	6160	40.989082	20
ACTCGGG	6335	40.93001	39
GGGGACT	3455	40.53602	1
CCTGTAG	6460	39.5672	24
TCTACGG	340	39.445686	5
AGGATCG	6390	39.278515	59
CCGGTTC	1045	39.16016	4