EGAF00005318315 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318315
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3347665
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10140	0.3028976913759292	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	10002	0.2987754151027657	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9339	0.2789705660512626	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8001	0.2390024091418944	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4246	0.12683467431777073	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4705	52.921967	9
TGGCGCG	5095	48.92825	15
CGCGGTG	5245	47.735653	10
GCCGGTT	870	45.84702	3
CCGAACT	900	44.360588	67
TCTACGG	345	42.857002	5
CTACTCG	5925	42.4957	37
TACTCGG	6005	42.011555	38
CGGTTCA	940	41.33548	5
GTAGTCC	6145	41.07221	27
TAGTCCC	6200	40.790554	28
CGTGCCT	6215	40.556553	20
ACTCGGG	6380	40.106922	39
TGTAGTC	6375	40.007412	26
TACGGCC	355	39.720303	7
CCTGTAG	6580	38.62355	24
CGAACTT	1070	38.048496	68
CCGGTTC	1070	37.276928	4
TCTGGTC	2995	36.97567	10
AGGATCG	6610	36.90706	59