FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005318317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005318317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3307941
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC100290.30317953071109793No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN97070.29344537886256133No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA93380.2822904036075613No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC79940.2416609002397564No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT41890.12663466488670747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)