EGAF00005318318 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318318
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4333934
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	19805	0.456975117756754	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	9623	0.22203845282369322	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	7962	0.18371299609084957	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	6466	0.1491947039341162	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	6214	0.14338012530878413	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5746	0.13258162214745312	No Hit
GTGGGGTGGGGGTGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGG	4399	0.10150131497157087	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGACCG	1035	38.45326	70
CGCGGCA	6190	36.744778	32
GCGGCAC	6200	36.583584	33
TCGCCGG	6010	35.182247	48
CCCGTCG	6020	35.032173	44
CCGTCGC	6165	34.17406	45
CGGCACC	6635	34.092583	34
GCACCCC	7165	31.88151	36
CACCCCC	7560	30.27459	37
CCCCCGA	7585	30.22195	19
ACCCGCG	7605	30.039602	25
GGCACCC	7785	29.289099	35
CGTACGT	255	28.430803	19
AGTCCGC	8185	28.290022	7
CAGTCCG	7920	28.060158	6
CCCCGAC	8405	27.318964	20
TCCGCCC	8820	27.309029	9
GTTCTCG	2325	27.160795	13
CGCCCTA	2625	27.021114	61
GTCCGCC	8590	26.956205	8