EGAF00005318328 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318328
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4093391
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	27608	0.6744530390573488	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	22990	0.5616370388267331	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	9835	0.2402653447960383	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7164	0.17501382105936128	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4916	0.12009602796312396	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4719	0.11528339218022418	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	4302	0.1050962392793652	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4294	0.10490080229325759	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4218	0.10304415092523533	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	8105	36.761047	32
GCGGCAC	8355	35.526733	33
CGGCACC	8590	34.667652	34
TAGTCCG	515	34.40564	6
TCGCCGG	8200	34.402752	48
CCGTCGC	8275	34.12766	45
CCCGTCG	8400	33.82838	44
CCCCCGA	9225	32.436504	19
GCACCCC	9395	31.945782	36
CACCCCC	9720	31.02685	37
GGCACCC	9825	30.547432	35
ACCCGCG	9840	30.513132	25
AGGACCG	895	29.170544	70
CCCCGAC	10405	28.91029	20
CCCCCGT	9815	28.814514	42
AGGAGGG	14065	28.643915	70
AGTCCGC	10715	28.271475	7
CAGTCCG	10305	27.676487	6
CCGCGCG	10875	27.562532	27
CGTCGCC	10395	27.402346	46