EGAF00005318332 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318332
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4162567
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	27407	0.6584158285019797	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	23158	0.5563393934560092	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	9560	0.22966597294409916	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7120	0.17104829784121192	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4794	0.11516931739477107	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4698	0.11286304821039517	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	4496	0.10801027346827091	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	8430	38.220844	32
GCGGCAC	8625	37.43709	33
CGGCACC	8830	36.40475	34
TCGCCGG	8465	35.256145	48
CCCGTCG	8475	35.112858	44
CCGTCGC	8525	34.992615	45
GCACCCC	9505	33.9216	36
CCCCCGA	9505	33.77496	19
CACCCCC	9935	32.66484	37
GGCACCC	10135	31.812027	35
ACCCGCG	10210	31.35251	25
TAGTCCG	595	30.930523	6
CCCCCGT	9935	30.022549	42
CCCCGAC	10780	29.769823	20
AGGAGGG	14590	29.729952	70
AGTCCGC	11255	28.433516	7
CGTCGCC	10550	28.314327	46
CCGCGCG	11485	27.915728	27
CAGTCCG	10840	27.729994	6
GTCCGCC	11690	27.346315	8