EGAF00005318333 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318333
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4162567
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	22943	0.5511743114285007	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11135	0.2675032017502661	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11043	0.2652930271152392	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5462	0.1312171071360533	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5456	0.1310729653120298	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6245	51.32733	9
CCGAACT	1035	47.969414	67
TGGCGCG	6760	47.81958	15
CGCGGTG	7030	45.838173	10
CGGTTCA	1060	45.634125	5
GCCGGTT	1110	43.269028	3
CTACTCG	7720	42.74527	37
TACTCGG	7735	42.69916	38
GTAGTCC	8000	41.261456	27
CGTGCCT	7985	41.15985	20
ACTCGGG	8255	40.6801	39
TGTAGTC	8155	40.400146	26
TAGTCCC	8140	40.384106	28
CCTGTAG	8595	38.79343	24
CCGGTTC	1250	38.6954	4
GCGTGCC	8625	38.275436	19
AGGATCG	8300	37.903084	59
GCTACTC	8830	37.487064	36
AGTCCCA	8825	37.132565	29
CGAACTT	1415	37.04528	68