EGAF00005318337 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318337
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3957893
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17156	0.4334629561739037	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9612	0.24285648955138503	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8457	0.2136742958943054	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4333	0.10947744165898371	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4670	50.937195	9
TGGCGCG	5060	47.216198	15
CCGAACT	805	45.83107	67
GGGGACT	4835	45.61363	1
CGGCATA	315	45.13436	1
CGCGGTG	5460	43.818794	10
TCTGGTC	4425	43.754402	10
CGGTTCA	875	43.0707	5
GGACTCT	4850	42.98719	3
GGGACTC	4990	42.40956	2
ACTCTTC	4635	42.295757	5
CTACTCG	5835	41.417233	37
GCCGGTT	935	41.04638	3
TACTCGG	5905	40.936657	38
GTAGTCC	5925	40.856003	27
TACGGCC	360	40.337624	7
TAGTCCC	6030	40.266068	28
CGGGACT	1060	39.910576	1
TGTAGTC	6100	39.79039	26
CTGGTCC	4910	39.643673	11