EGAF00005318341 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318341
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4019980
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17318	0.43079816317494124	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9617	0.23923004592062647	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8290	0.206219931442445	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4268	0.10616968243623101	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4850	49.61069	9
TGGCGCG	5200	46.8022	15
GGGGACT	4965	46.56056	1
ACTCTTC	4715	46.55975	5
TCTGGTC	4670	45.748764	10
CGGCAAT	350	45.619766	1
GGACTCT	5050	44.63215	3
GTCTACG	505	44.495235	4
CGCGGTG	5665	42.717506	10
CTGGTCC	5020	42.490242	11
GGGACTC	5245	42.379616	2
CGGGACT	975	41.296818	1
TTCTGGT	5240	41.168125	9
TACGGCC	540	40.97366	7
CGGCATA	255	40.8361	1
TCTACGG	560	40.745018	5
GGGGTAG	1815	40.734856	1
CTACTCG	6010	40.601685	37
GTAGTCC	6075	40.06909	27
TACTCGG	6095	40.050983	38