EGAF00005318344 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318344
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3286950
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18105	0.5508145849495734	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7011	0.21329804225802035	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5599	0.17034028506670318	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4697	0.14289843167678243	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGCGGACACCCG	3833	0.11661266523676965	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	3415	0.103895708787782	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5250	37.1995	32
GCGGCAC	5345	36.427433	33
TCGCCGG	5270	35.611862	48
CGGCACC	5545	35.257767	34
CCGTCGC	5470	34.34913	45
CCCGTCG	5580	33.893566	44
TGGCCGT	1440	33.453907	70
GTCGGTT	290	33.16033	4
CCCCCGA	5975	33.023537	19
TAGTCCG	375	32.970844	6
CCCCCGT	5885	32.090843	42
CCCCGAC	6180	31.995432	20
AGTCCGC	6315	31.598148	7
ACCCGCG	6225	31.537987	25
GCACCCC	6295	31.481985	36
AGGAGGG	8890	30.998182	70
CAGTCCG	6130	30.590815	6
CCGCGCG	6560	30.16373	27
GTCCGCC	6675	29.94543	8
CACCCCC	6670	29.79144	37