EGAF00005318346 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318346
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3290179
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18152	0.5517025061554401	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7052	0.2143348431802647	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5781	0.17570472609544951	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4734	0.14388274923643973	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGCGGACACCCG	3994	0.12139157170476134	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	3478	0.10570853439888833	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1335	44.687584	70
CGCGGCA	5370	35.86191	32
GCGGCAC	5535	34.93278	33
CGGCACC	5645	34.332825	34
GTTCCGT	445	34.08127	1
ATGGCCG	1405	33.79221	69
TCGCCGG	5480	31.512667	48
CCCCCGA	6285	31.062288	19
CCGTCGC	5625	30.737926	45
CCCCGAC	6445	30.409859	20
GCACCCC	6425	30.25394	36
CCCGTCG	5755	30.207561	44
ACCCGCG	6535	29.987358	25
AGTCCGC	6660	29.498589	7
GGCACCC	6690	29.193876	35
AGGAGGG	8730	28.998522	70
CAGTCCG	6515	28.784431	6
CCCCCGT	6040	28.74624	42
CCGCGCG	6775	28.698067	27
CACCCCC	6795	28.577515	37