EGAF00005318361 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318361
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3768236
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8906	0.23634400817783177	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7720	0.2048703955909343	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7531	0.1998547861651977	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7015	0.1861613763044565	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5862	0.1555635050458623	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4021	0.10670775397294649	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3813	0.10118792984303532	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4135	47.695274	9
TGGCGCG	4390	44.689014	15
CGCGGTG	4730	41.98215	10
TGGTCCG	1230	41.410133	12
TACTCGG	4970	39.864693	38
GGGGACT	4110	39.72355	1
CCGAACT	675	39.59984	67
TCTGGTC	3740	39.476234	10
CTACTCG	4990	39.407223	37
ACTCTTC	3780	38.880543	5
CGGGTAG	530	38.424206	1
GTAGTCC	5260	38.101883	27
CGGCTAT	265	37.77295	1
ACTCGGG	5470	37.579945	39
TAGTCCC	5335	37.519512	28
GGACTCT	4110	37.433628	3
CGTGCCT	5375	36.74782	20
TGTAGTC	5490	36.55392	26
CTGGTCC	4090	36.013927	11
TTCTGGT	4120	35.922577	9