EGAF00005318365 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318365
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3737706
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8505	0.22754598676300383	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8023	0.21465037646085594	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7050	0.18861836645257812	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6853	0.18334775394319403	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5452	0.1458648700566604	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4027	0.10773988109284142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4085	48.99968	9
TGGCGCG	4185	47.992836	15
CGGCATA	200	46.699997	1
CGCGGTG	4595	43.41124	10
CCGAACT	735	41.685177	67
GCCGGTT	725	41.34079	3
CTACTCG	4900	41.24078	37
TGGTCCG	1120	41.2183	12
TACTCGG	4945	40.67243	38
GTAGTCC	5055	39.997425	27
TAGTCCC	5050	39.982574	28
TGTAGTC	5175	39.653957	26
TCTGGTC	3485	39.04842	10
CGTGCCT	5245	38.79554	20
CGGTACT	215	38.614986	1
GGGGACT	4070	38.587315	1
CCTGTAG	5535	37.3633	24
ACTCTTC	3725	37.27245	5
ACTCGGG	5595	36.836914	39
CGGTTCA	825	36.748352	5