EGAF00005318369 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318369
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3978612
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	42519	1.0686892815886546	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	20669	0.5195027813719961	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	18628	0.4682034840291036	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15958	0.4010946531101801	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11490	0.28879418249379435	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9642	0.24234582311620234	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8096	0.20348805060659345	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7665	0.19265512696387585	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6341	0.15937718983404262	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5586	0.14040072266408485	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5154	0.12954266462776465	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	5100	0.12818540737322462	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4717	0.11855893462343148	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4163	0.10463448056759495	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	8105	64.62237	4
TCTACGG	8225	63.721333	5
TACGGCC	8255	63.48976	7
CTACGGC	8295	63.183598	6
CGTCTAC	1790	61.439526	3
ACGGCCA	8565	61.191822	8
GGGTCTA	6070	60.481277	2
GCGTCTA	1585	60.074326	2
CGGCCAT	8775	59.688236	9
CCTGGTT	12440	58.87389	70
GCCATAC	8870	58.817226	11
GGCCATA	9080	57.758995	10
CCATACC	9045	57.75524	12
CATACCA	9175	56.936913	13
CCGAACT	1380	55.274204	67
TACCACC	9435	55.040066	15
GCGCGGT	9865	54.76541	9
CGGTCTA	1050	53.035187	2
ATACCAC	9935	52.78895	14
CTGAACG	9955	52.13957	22