EGAF00005318411 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318411
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3181989
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	29437	0.9251131917803613	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	13652	0.4290398238334576	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12820	0.4028926561342606	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11892	0.37372850754669484	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11625	0.3653375294509189	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8096	0.25443205491910875	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5698	0.1790703864783945	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5614	0.17643052820107172	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5043	0.15848577729212765	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	3667	0.11524238455884041	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3655	0.11486526194779428	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3327	0.10455724391253395	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3238	0.10176025121394197	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	5820	63.613758	5
GTCTACG	5825	63.559155	4
TACGGCC	5800	63.260544	7
CTACGGC	5865	62.90238	6
ACGGCCA	5990	61.140717	8
GGGTCTA	4425	60.68248	2
CCTGGTT	8960	59.494682	70
CGGCCAT	6125	59.405586	9
GCCATAC	6205	58.42108	11
GGCCATA	6365	57.32546	10
CGTCTAC	1375	56.712204	3
CCATACC	6410	56.39399	12
CATACCA	6470	56.1313	13
GCGTCTA	1235	52.98363	2
TACCACC	6850	52.910088	15
CTGAACG	6985	52.018627	22
GCGCGGT	6580	51.587185	9
ACCACCC	7150	51.073467	16
CCGAACT	1055	50.569843	67
CGCGGTG	6810	49.994267	10