EGAF00005318417 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318417
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3212893
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	15432	0.48031478172475706	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13422	0.4177543416478544	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13034	0.4056779979912185	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	9254	0.2880270211301777	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6871	0.2138571063524369	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5776	0.17977567257919888	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3990	0.12418714224220974	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3095	62.37708	4
TACGGCC	3175	60.80537	7
TCTACGG	3225	60.18051	5
CTACGGC	3250	59.50731	6
GGTCTAC	2850	54.79263	3
ACGGCCA	3555	54.498013	8
CGGCCAT	3545	54.45897	9
GGGTCTA	2670	54.400517	2
GCCATAC	3565	54.345146	11
CCATACC	3695	52.155712	12
GCGCGGT	6630	52.052917	9
CCGAACT	1125	51.904053	67
CATACCA	3735	51.59715	13
CGCGGTG	6955	49.964443	10
GGCCATA	3920	49.336414	10
TGGCGCG	7060	49.076916	15
GCCGGTT	1170	48.773216	3
ATACCAC	4005	48.45996	14
TACCACC	3930	48.255234	15
CCTGGTT	5775	47.91232	70