EGAF00005318420 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318420
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3264226
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	13701	0.4197319670880631	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	9103	0.27887162224674394	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6282	0.19244991002461226	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	3894	0.1192932107029354	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3694	0.11316618395907636	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	4205	0.0	36.92092	32
TGGCCGT	1840	0.0	35.847576	70
GCGGCAC	4805	0.0	35.21485	33
TCGCCGG	4565	0.0	34.900284	48
CGGCACC	4815	0.0	34.803635	34
CCGTCGC	4680	0.0	33.83752	45
CCCGTCG	4825	0.0	32.855885	44
CGTACGT	115	5.0931703E-11	32.765003	19
CCCCCGA	5440	0.0	31.609688	19
GCACCCC	5455	0.0	31.387356	36
AGGACCG	785	0.0	30.196444	70
GGCACCC	5660	0.0	29.86809	35
CACCCCC	5710	0.0	29.76738	37
AGGAGGG	7890	0.0	29.390244	70
ACCCGCG	5890	0.0	29.277546	25
CCCCCGT	5515	0.0	28.881384	42
ATGGCCG	1825	0.0	28.530544	69
CCCCGAC	6115	0.0	27.965757	20
AGTCCGC	6250	0.0	27.42494	7
ACCGGTT	200	0.0	27.367678	3