EGAF00005318421 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318421
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3264226
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	15131	0.4635402083066552	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13250	0.40591552178066104	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12812	0.3924973332116098	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	9061	0.27758494663053357	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6925	0.21214830100611906	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5611	0.1718937352989652	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4016	0.12303069701668941	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2910	61.214962	4
TCTACGG	2900	60.957264	5
TACGGCC	2990	59.122425	7
CTACGGC	3095	57.116657	6
CCGAACT	1080	53.375717	67
ACGGCCA	3310	53.303364	8
GCGCGGT	6845	52.999874	9
GCCATAC	3325	52.75439	11
CGGCCAT	3410	51.740215	9
GCCGGTT	1110	51.44064	3
GGTCTAC	2865	51.316463	3
CCATACC	3455	50.965786	12
GGCCATA	3525	50.05224	10
GGGTCTA	2705	49.801434	2
CGCGGTG	7320	49.607388	10
CATACCA	3565	49.2973	13
TGGCGCG	7415	49.156273	15
CGGTTCA	1225	47.730164	5
CCGGTTC	1235	47.064655	4
TACCACC	3800	46.16009	15