EGAF00005318423 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318423
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3434884
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	32116	0.9349951846991049	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	18618	0.5420270378854133	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15789	0.4596661779553545	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14690	0.4276709198913268	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8544	0.2487420244759357	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8242	0.23994987894787714	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7462	0.2172416885111695	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6439	0.18745902336148762	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4290	0.12489504740189189	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4094	0.11918888672805253	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4036	0.11750032897763069	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3646	0.10614623375927688	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	6020	63.79656	4
TCTACGG	6085	63.17124	5
TACGGCC	6175	62.305855	7
CTACGGC	6215	61.959827	6
GCGTCTA	1035	59.41935	2
ACGGCCA	6540	58.82854	8
CGGCCAT	6565	58.708614	9
GGGTCTA	4855	57.917038	2
CCTGGTT	9800	57.432026	70
GCCATAC	6720	57.140244	11
CCGAACT	1125	56.779114	67
CGTCTAC	1260	56.129246	3
CCATACC	6925	55.553875	12
GGCCATA	6940	55.536312	10
CATACCA	6965	55.23483	13
GCGCGGT	8070	53.98388	9
CGGTCTA	810	53.56911	2
TACCACC	7245	52.81643	15
GCCGGTT	1170	52.562508	3
CGCGGTG	8380	52.027637	10