EGAF00005318429 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318429
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3434023
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	31506	0.9174661905293005	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17287	0.5034037337548409	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15240	0.4437943484944626	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14319	0.41697449318190355	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8476	0.2468242058949518	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	8371	0.2437665676671356	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7327	0.21336490757342044	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6076	0.17693533211629625	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4147	0.12076214981670189	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3964	0.11543312319107939	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3802	0.11071562421102014	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3593	0.10462946811946221	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	6035	63.900604	4
TACGGCC	6110	63.1832	7
TCTACGG	6115	63.020718	5
CTACGGC	6210	62.056633	6
GGGTCTA	4695	60.037247	2
ACGGCCA	6530	59.74716	8
CGGCCAT	6555	59.31082	9
GCCATAC	6695	57.917484	11
CGTCTAC	1205	57.827106	3
CCTGGTT	9710	57.065033	70
CATACCA	6880	56.209496	13
CCATACC	6900	56.195107	12
GGCCATA	6950	55.989082	10
GCGTCTA	1100	55.287853	2
GCGCGGT	8380	54.67001	9
TACCACC	7120	54.12129	15
CCGAACT	1275	53.046062	67
GCCGGTT	1225	52.14274	3
CGCGGTG	8840	52.057068	10
ATACCAC	7445	51.942245	14