EGAF00005318431 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318431
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4416916
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13348	0.30220180777719113	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10021	0.22687775814618164	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7630	0.17274496503895478	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	6978	0.15798353421255917	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6493	0.14700302201807777	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4670	0.10572988030562501	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4513	0.10217536398699908	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6340	50.87512	9
CCGAACT	1030	47.893543	67
TGGCGCG	6870	47.353153	15
CGCGGTG	6965	46.409355	10
GCCGGTT	1170	42.712517	3
CGGCAAT	480	42.522743	1
CGGCATA	385	42.232582	1
CGGTTCA	1200	42.213852	5
CTACTCG	8215	39.971207	37
GTAGTCC	8275	39.898346	27
CGTGCCT	8280	39.817265	20
TACTCGG	8200	39.807415	38
TCTACGG	685	39.742523	5
TAGTCCC	8370	39.41901	28
TGTAGTC	8375	39.333218	26
CCGGTTC	1300	38.701553	4
CGAACTT	1320	38.626995	68
GTCTACG	710	37.857777	4
ACTCGGG	8810	37.77671	39
CCTGTAG	8855	37.339687	24