EGAF00005318432 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318432
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4430458
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	28493	0.6431163550134095	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	11514	0.25988283829798187	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7476	0.16874101955147752	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5887	0.13287565303632265	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	4910	0.1108237568215295	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4717	0.10646754805033701	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4706	0.10621926672140893	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4585	0.10348817210320017	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4444	0.10030565688694036	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	7895	38.970177	32
GCGGCAC	8170	37.79754	33
CGGCACC	8290	37.094303	34
AGGACCG	1095	36.5931	70
TCGCCGG	8150	35.026264	48
CCGTCGC	8240	34.697746	45
GCACCCC	8940	34.580883	36
CCCGTCG	8395	34.2794	44
CCCCCGA	9160	34.043533	19
GGCACCC	9265	33.280556	35
CACCCCC	9535	32.659985	37
TAGTCCG	505	32.085083	6
ACCCGCG	9775	31.59055	25
CCCCGAC	10355	30.053612	20
CCCCCGT	9825	29.292484	42
AGGAGGG	14150	28.706997	70
AGTCCGC	11440	27.7543	7
TCCGCCC	11965	27.372065	9
CGCCCTA	1610	27.211721	61
CCCGACC	11545	27.083336	21