EGAF00005318433 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318433
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4430458
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13882	0.31333103710722454	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10587	0.23895949357831628	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7716	0.17415806672808995	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	7022	0.15849377197571898	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6570	0.14829166645976558	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	5020	0.1133065701108102	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4579	0.10335274592378485	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6250	52.71221	9
TGGCGCG	6635	49.340805	15
CCGAACT	1005	49.085365	67
CGCGGTG	6950	47.448364	10
CGGTTCA	1145	43.039173	5
GTAGTCC	7925	41.80172	27
GCCGGTT	1195	41.52675	3
TAGTCCC	8025	41.508743	28
TACTCGG	8080	41.25071	38
CTACTCG	8050	40.99803	37
CGTGCCT	8105	40.97795	20
TGTAGTC	8125	40.973732	26
CGAACTT	1240	40.81791	68
CGGGTAG	555	39.857746	1
ACTCGGG	8585	39.403687	39
CGGCATA	440	39.27743	1
CCTGTAG	8595	38.83524	24
TACGGCC	600	38.481934	7
GCGTGCC	8685	38.432537	19
GGCGCGT	8720	38.17545	16