EGAF00005318434 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318434
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4538475
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	28616	0.6305201637113788	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	11762	0.2591619431637279	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7653	0.16862492357014194	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	5944	0.13096910305774515	No Hit
GGGGGCAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	4983	0.10979458959231901	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4914	0.10827425511873481	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	4816	0.10611493948958627	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4712	0.10382342086273473	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4678	0.10307427054241788	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	8380	39.3993	32
GCGGCAC	8715	37.899494	33
CGGCACC	8850	37.296295	34
TCGCCGG	8755	35.84674	48
CCGTCGC	8795	35.49763	45
CCCGTCG	8910	35.287254	44
GCACCCC	9615	34.648922	36
GGCACCC	9825	33.683178	35
CCCCCGA	9950	33.590458	19
CACCCCC	10120	33.041355	37
ACCCGCG	10330	32.258972	25
GTGCCGT	880	31.378647	1
CCCCCGT	10100	30.853622	42
CCCCGAC	10945	30.445936	20
AGGACCG	1115	30.104067	70
TATCGGA	335	29.84108	8
CGCCCTA	1860	29.817442	61
TAGTCCG	620	29.467651	6
AGTCCGC	11925	28.328854	7
AGGAGGG	15580	28.007603	70