EGAF00005318437 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318437
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4496719
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14010	0.3115604955524239	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10478	0.2330143377871733	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7912	0.17595050969384565	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	7045	0.15666978523674707	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6427	0.14292643147147954	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	5106	0.11354945683730738	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4569	0.10160741642962347	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	6560	51.640923	9
TGGCGCG	6940	49.0114	15
CGCGGTG	7010	48.47337	10
CCGAACT	1165	48.473106	67
GCCGGTT	1235	44.367977	3
CGGTTCA	1210	44.14543	5
CGAACTT	1390	42.95165	68
CTACTCG	8195	41.595898	37
TACTCGG	8210	41.362995	38
CGGCATA	295	41.05752	1
GTAGTCC	8340	40.926544	27
CGGCAAT	550	40.89756	1
CGTGCCT	8380	40.74271	20
TAGTCCC	8485	40.40264	28
CCGGTTC	1355	40.18438	4
TGTAGTC	8510	40.179855	26
ACTCGGG	8815	39.130608	39
CCTGTAG	8795	39.0175	24
GGCGCGT	8900	38.488926	16
GCGTGCC	9055	38.041134	19