EGAF00005318454 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318454
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1210022
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	2395	0.19793028556505582	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	2247	0.18569910299151585	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	2013	0.16636061162524318	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	1665	0.13760080395232482	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1350	0.11156821942080392	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	1327	0.1096674275343754	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGAT	35	2.2716511E-5	49.29048	21
CGCGGCA	745	0.0	34.889683	32
GTACGGC	90	5.2605174E-9	34.453342	14
GATTTCG	180	0.0	32.669106	28
GCGGCAC	810	0.0	32.534016	33
CGCGAGA	85	1.193057E-7	32.51822	25
CCGTCGC	795	0.0	32.455402	45
TCGCCGG	815	0.0	32.141987	48
ACGATAA	55	2.8546544E-4	32.076828	64
CGGCACC	825	0.0	31.954468	34
CCCGTCG	825	0.0	31.680588	44
ACCCGCG	850	0.0	31.298786	25
GCGAGTC	45	0.0045018625	30.833261	34
CCCCCGA	920	0.0	29.23707	19
TCGTTGG	190	0.0	29.184912	32
CCGCGCG	925	0.0	28.787338	27
TTCACGA	110	3.9117367E-7	28.396887	69
CGCACGA	75	5.6014884E-5	27.990263	51
ATCGACG	75	5.714774E-5	27.90813	46
TACGGCC	125	4.2127795E-9	27.562675	15