EGAF00005318470 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318470
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3630731
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	16272	0.4481742106479384	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7192	0.1980868315499	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4776	0.13154375799253648	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4455	0.12270256320283711	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3873	0.10667273339721393	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3657	0.10072351821162186	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1870	37.569973	70
CGCGGCA	5145	36.31987	32
AGGACCG	975	34.98433	70
GCGGCAC	5375	34.713825	33
CGGCACC	5580	33.32457	34
CCGTCGC	5255	33.179176	45
CCCGTCG	5370	32.645798	44
TCGCCGG	5290	32.620308	48
ATGGCCG	1815	31.270847	69
GTTCCGT	500	31.138685	1
GCACCCC	6040	30.97704	36
CCCCCGA	6105	30.849276	19
CACCCCC	6415	29.231573	37
GACGTAT	445	28.920963	44
CCCCCGT	6135	28.490616	42
ACCCGCG	6655	28.179623	25
GGCACCC	6675	27.920155	35
TACGGGT	485	27.726765	6
CCCCGAC	6845	27.570698	20
CGATCTA	205	27.194477	47