EGAF00005318474 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318474
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3735387
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	17791	0.4762826448772242	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7665	0.2051996218865676	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4969	0.1330250386372282	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4522	0.12105840706732662	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4100	0.10976105019372825	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGACCG	1030	38.727116	70
CGCGGCA	5555	37.014454	32
GCGGCAC	5890	34.975983	33
CGGCACC	5925	34.77967	34
CCGTCGC	5795	34.019012	45
CCCGTCG	5825	33.879753	44
TCGCCGG	5870	33.70071	48
TGGCCGT	1720	31.998037	70
GCACCCC	6625	31.291569	36
CCCCCGA	6700	30.886246	19
CCCCCGT	6505	30.248217	42
CACCCCC	6950	30.14382	37
GGCACCC	7040	29.33544	35
ACCCGCG	7070	29.307558	25
CGGATAG	550	28.981052	35
GACGTAT	555	28.221016	44
CCCCGAC	7415	27.771069	20
TAGTCCG	385	27.757856	6
CGTATCA	570	27.518185	46
TCGGATA	580	27.467978	34