EGAF00005318490 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318490
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3330676
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18210	0.5467358578258588	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8812	0.26457091593418275	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	5126	0.15390269122544492	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4481	0.13453725309816986	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	4085	0.12264777480607542	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3944	0.11841439995964782	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3743	0.11237958900835747	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3529	0.10595446690101348	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5975	36.583256	32
GCGGCAC	6290	34.81623	33
CGGCACC	6495	33.732086	34
TCGCCGG	6160	33.638668	48
CCCGTCG	6330	33.09875	44
CCGTCGC	6265	33.074837	45
TATCGGA	285	32.71032	8
GCACCCC	6905	32.14924	36
CCCCCGA	7180	31.126373	19
GTTATCG	290	30.955742	6
CACCCCC	7270	30.736193	37
GGCACCC	7180	30.668478	35
ACCCGCG	7545	29.518745	25
TTATCGG	320	29.13263	7
ATCGGAA	320	28.053644	9
CCCCGAC	8045	27.911821	20
CGCCCTA	1870	27.504147	61
AGGAGGG	10405	27.210644	70
AGTCCGC	8390	26.667294	7
CAGTCCG	8135	26.654343	6