EGAF00005318492 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318492
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3284667
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	17870	0.5440429730015249	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8533	0.2597828029447125	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4985	0.15176576499231126	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4260	0.12969351231038032	No Hit
CGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCTTCA	4064	0.12372639296464451	No Hit
TGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3941	0.11998172113033073	No Hit
AGGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCAC	3679	0.11200526567837774	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	3373	0.10268925282228	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5675	0.0	36.32715	32
GCGGCAC	5950	0.0	34.54173	33
CGGCACC	6005	0.0	34.232166	34
CCGTCGC	5710	0.0	33.76315	45
TCGCCGG	5765	0.0	33.493477	48
CCCGTCG	5865	0.0	33.216156	44
GCACCCC	6405	0.0	32.055393	36
CCCCCGA	6760	0.0	30.671717	19
CGTACGT	275	0.0	30.158663	19
CACCCCC	6800	0.0	30.156652	37
GGCACCC	6895	0.0	29.817158	35
CGATCTA	275	0.0	29.132957	47
ACCCGCG	7055	0.0	29.121494	25
CGCCCTA	1605	0.0	28.309248	61
TCCGCTA	160	1.8189894E-12	28.119404	1
GTTCTCG	2220	0.0	27.85233	13
CTCGTTT	2225	0.0	27.789738	16
AGTCCGC	7605	0.0	27.436306	7
TCGTTTG	2260	0.0	27.210667	17
CCCCGAC	7655	0.0	27.089388	20