EGAF00005318495 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318495
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3434190
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14403	0.4194002079092886	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12128	0.35315460123056674	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12104	0.3524557464787912	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	9025	0.26279850561558915	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6918	0.20144488219929593	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6323	0.18411910814486093	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3958	0.11525279614698081	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1965	61.008812	4
TACGGCC	1970	60.153618	7
TCTACGG	2035	58.91023	5
CTACGGC	2105	57.114872	6
GCGCGGT	6805	53.30522	9
GCCGGTT	1055	53.225212	3
GCCATAC	2275	52.543335	11
CGCGGTG	7155	50.69844	10
CGGTTCA	1115	50.360336	5
TGGCGCG	7255	50.237053	15
CCGAACT	1130	49.09258	67
CCATACC	2445	48.890724	12
ACGGCCA	2465	48.63309	8
CGGCCAT	2470	47.976776	9
CGAACTT	1155	47.635567	68
GGGTCTA	2025	46.783195	2
CATACCA	2565	46.469135	13
GAACGCG	2555	46.085106	24
GGCCATA	2630	45.451645	10
CGTGCCT	8165	45.119217	20