EGAF00005318497 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318497
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3443784
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15063	0.43739677052916215	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12603	0.3659637189788907	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12373	0.3592850190371986	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8759	0.25434231647513317	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7071	0.20532646646828023	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6304	0.18305445405402893	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4283	0.12436900804463925	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	1830	58.555912	7
GTCTACG	1840	58.050415	4
TCTACGG	1855	57.58101	5
CTACGGC	1945	55.093742	6
GCGCGGT	6510	53.24495	9
CGCGGTG	6910	50.259556	10
TGGCGCG	6950	49.87333	15
GCCGGTT	990	48.725273	3
CGGTCTA	250	48.243637	2
CCGAACT	990	48.119514	67
GCCATAC	2235	47.479855	11
ACGGCCA	2265	47.310078	8
CGAACTT	1030	46.34474	68
CGGCCAT	2305	46.04063	9
CGCGTGC	7900	44.244774	18
GGCGCGT	7915	44.053936	16
CGTGCCT	7965	43.865334	20
GGGTCTA	1920	43.613113	2
GCGTGCC	8020	43.511997	19
CTACTCG	8085	43.302494	37