EGAF00005318499 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318499
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3545095
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15056	0.42469947913948713	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12993	0.36650639827705606	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12454	0.35130229232220855	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8897	0.25096647621572904	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7278	0.20529774237361764	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6459	0.18219539955910913	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4226	0.11920696060331246	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1930	61.594883	4
TCTACGG	1975	60.36592	5
TACGGCC	1990	59.573856	7
CTACGGC	1995	59.41783	6
GCGCGGT	6845	53.06614	9
CGGCCAT	2325	50.990097	9
TGGCGCG	7190	50.798824	15
GCCATAC	2330	50.584145	11
CCGAACT	1050	50.407677	67
CGCGGTG	7245	50.374172	10
ACGGCCA	2380	50.246162	8
GCCGGTT	1085	47.953896	3
CCATACC	2475	47.481388	12
GGGTCTA	1940	47.423367	2
GAACGCG	2470	47.137337	24
CGGTTCA	1090	47.102352	5
CATACCA	2500	46.866734	13
CGAACTT	1185	46.344852	68
GCGTCTA	525	45.943233	2
TGAACGC	2560	45.33493	23