EGAF00005318503 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318503
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3485845
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	17043	0.48892019008303583	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15590	0.4472373269608947	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11513	0.3302785981591264	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9256	0.26553102619307517	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5132	0.14722398729719766	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4493	0.12889270750707504	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5370	52.20317	9
CCGAACT	985	48.41482	67
TGGCGCG	5930	47.56575	15
GCCGGTT	1040	46.469986	3
CGGGACT	1035	45.877586	1
GGGGACT	4170	45.465015	1
CGCGGTG	6270	44.875805	10
GGACTCT	4445	44.570015	3
TACGGCC	580	43.72417	7
TCTGGTC	4095	43.18495	10
GTCTACG	580	43.13579	4
GGGACTC	4625	42.84281	2
CGGTTCA	1135	42.57613	5
ACTCTTC	4380	42.566475	5
CTACTCG	6675	42.513317	37
CGGGTAG	430	42.41009	1
TCTACGG	590	42.404675	5
TACTCGG	6700	42.12686	38
TAGTCCC	6840	42.03495	28
GTAGTCC	6885	41.78244	27