EGAF00005318505 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318505
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3470520
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	17021	0.4904452358724341	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15848	0.45664626626557403	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11565	0.33323536530548736	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9414	0.27125618062999207	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5189	0.1495164989684543	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4617	0.1330348189896615	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	5360	53.67263	9
CCGAACT	875	50.359894	67
GTCTACG	625	49.376255	4
TGGCGCG	5800	49.36515	15
CGGTTCA	905	48.118366	5
GCCGGTT	925	47.077965	3
TCTACGG	675	45.210773	5
CGCGGTG	6415	45.16512	10
TACGGCC	715	43.161064	7
GGGGACT	4180	43.109818	1
CTACTCG	6665	43.006104	37
GTAGTCC	6740	42.911934	27
TACTCGG	6720	42.786396	38
TGTAGTC	6770	42.693787	26
TAGTCCC	6810	42.44799	28
CGTGCCT	6735	42.305058	20
ACTCGGG	7060	41.592945	39
CCGGTTC	1055	41.276886	4
GCGTGCC	6950	41.270298	19
GGACTCT	4405	41.25586	3