EGAF00005318511 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318511
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4001648
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	48146	1.2031543004282237	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	25520	0.6377372522520721	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	22485	0.5618934998780503	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	20849	0.5210103437383798	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14086	0.35200497395073227	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	12132	0.3031750918621528	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8433	0.21073817587154092	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5991	0.14971331811293745	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5494	0.13729343510473685	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5484	0.13704353806231834	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	4896	0.12234959196810916	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4887	0.12212468462993248	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4807	0.12012550829058428	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4465	0.11157902943987076	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4167	0.10413209757579878	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4149	0.10368228289944542	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	9605	65.09867	4
TCTACGG	9610	64.92148	5
CTACGGC	9750	63.918644	6
TACGGCC	9670	63.735317	7
CGTCTAC	2125	62.065918	3
GCGTCTA	1820	61.68679	2
GGGTCTA	7155	61.6093	2
ACGGCCA	10035	61.520027	8
CGGCCAT	10230	60.182083	9
GCCATAC	10210	60.031673	11
GGCCATA	10455	59.052322	10
CATACCA	10470	58.806965	13
CCATACC	10560	58.305767	12
CCTGGTT	15465	57.46479	70
CGGTCTA	1100	57.293365	2
TACCACC	11025	56.40883	15
CCGAACT	1945	55.446815	67
GCGCGGT	11485	54.924965	9
ATACCAC	11450	54.43535	14
ACCACCC	11695	53.204647	16