EGAF00005318518 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318518
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4732179
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	24111	0.5095115801832517	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10114	0.21372817892138063	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACGACTTTCTGATAGGCAGCC	9780	0.20667011962142598	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8835	0.18670046082365016	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8225	0.17380999323990068	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6586	0.13917478607635086	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	6576	0.13896346693563366	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	6398	0.13520198623086743	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6040	0.12763676099319152	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5962	0.1259884716955973	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5666	0.11973342513036805	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5011	0.10589202141339116	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4893	0.10339845555292816	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2750	44.84788	70
CGCGGCA	7365	36.979183	32
AGGACCG	665	36.33525	70
GCGGCAC	7635	35.72483	33
CGGCACC	7915	34.425297	34
TCGCCGG	7510	33.540455	48
CCCGTCG	7555	33.266632	44
GTTCCGT	480	33.161114	1
ATGGCCG	3000	33.073437	69
CCGTCGC	7595	33.013863	45
ACCCGCG	8585	31.931328	25
GCACCCC	8685	31.509697	36
CCCCCGA	8770	31.407543	19
CACCCCC	8940	30.66604	37
GGCACCC	9095	29.893162	35
TATCGGA	220	29.793886	8
ACGACTT	3025	29.760605	30
GTCGGTT	420	29.569872	4
CGACTTT	3070	29.334036	31
CACGACT	3115	28.889397	29