EGAF00005318519 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318519
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4732179
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	24476	0.5172247288194297	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	18679	0.39472302294566625	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	16595	0.35068411402020083	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12656	0.267445504491694	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8813	0.18623555871407232	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7369	0.15572107479450797	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	7294	0.15413618123912895	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6579	0.13902686267784883	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4771	0.10082036203617827	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	5465	63.482895	7
TCTACGG	5565	63.27236	5
GTCTACG	5605	62.88235	4
CTACGGC	5695	61.58582	6
ACGGCCA	6010	57.84089	8
CGGCCAT	6135	56.494946	9
GCCATAC	6165	56.053394	11
GGGTCTA	4495	55.177624	2
GCGCGGT	9440	54.032406	9
CATACCA	6450	53.951477	13
CGTCTAC	1485	53.42415	3
CCATACC	6510	53.29529	12
GCGTCTA	1250	52.709286	2
GGCCATA	6660	52.094402	10
CCGAACT	1580	51.136166	67
GCCGGTT	1600	50.877792	3
TACCACC	6955	50.579544	15
CGCGGTG	10330	49.44496	10
CGGTCTA	760	49.020073	2
TGGCGCG	10405	48.98964	15