EGAF00005318521 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318521
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4743363
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	25082	0.5287809514051528	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	19273	0.40631509753733797	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	17136	0.3612626737612112	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12972	0.27347685597749954	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9105	0.19195241856885084	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	7630	0.16085633758158505	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7515	0.15843189736901858	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6550	0.138087681672265	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5370	64.21131	4
TCTACGG	5445	63.263527	5
TACGGCC	5540	62.116444	7
CTACGGC	5635	61.130417	6
GCGTCTA	1135	58.643597	2
ACGGCCA	6045	57.212433	8
GGGTCTA	4250	56.234585	2
GCCATAC	6100	55.790977	11
CGGCCAT	6180	55.683674	9
CGTCTAC	1370	55.120598	3
CATACCA	6340	53.733402	13
CCATACC	6375	53.384304	12
GGCCATA	6450	53.244682	10
GCGCGGT	9750	52.553303	9
CCGAACT	1680	50.888687	67
TACCACC	6910	49.152317	15
CGGTTCA	1705	48.73921	5
TGGCGCG	10510	48.720253	15
ATACCAC	7095	48.550053	14
GCCGGTT	1760	48.196205	3