EGAF00005318522 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318522
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4881127
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	26760	0.5482340451293318	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10932	0.22396467045417995	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACGACTTTCTGATAGGCAGCC	9866	0.2021254517655451	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	9159	0.18764109190357062	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8760	0.179466750199288	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7264	0.14881809057621323	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	6836	0.14004962378565441	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6725	0.13777555880025247	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6383	0.13076898019658165	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	6263	0.1283105315637147	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	6218	0.1273886133263896	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5282	0.1082127139900273	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	5193	0.10638936458731764	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2520	40.30383	70
CGCGGCA	8215	37.449078	32
GCGGCAC	8440	36.54676	33
CGGCACC	8670	35.590446	34
GTTCCGT	470	34.534657	1
TCGCCGG	8265	34.498787	48
CCCGTCG	8280	34.350002	44
CCGTCGC	8410	33.795834	45
GCACCCC	9605	32.58559	36
CCCCCGA	9580	32.525917	19
ACCCGCG	9680	32.174088	25
CACCCCC	9850	31.718708	37
TAGTCCG	510	31.10641	6
GGCACCC	9970	31.033716	35
ATGGCCG	2740	30.054775	69
TTCCGTT	700	29.564693	2
CCCCGAC	10595	29.417185	20
GTCGGTT	400	29.318321	4
ACGACTT	3165	29.31639	30
CGACTTT	3295	28.378078	31