EGAF00005318523 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318523
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4881127
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	25087	0.5139591737727783	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	19483	0.39914962261789133	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	17871	0.3661244626497118	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	13499	0.2765549841255923	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9300	0.1905297690471893	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	7705	0.1578528893019993	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7498	0.1536120654103038	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6731	0.13789848123189585	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4976	0.10194366997621657	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4955	63.11103	4
TCTACGG	4980	62.724976	5
TACGGCC	5005	62.082508	7
CTACGGC	5110	60.93244	6
ACGGCCA	5425	57.65754	8
CGGCCAT	5550	56.17254	9
GCCATAC	5640	55.459602	11
CCATACC	5815	53.96849	12
GGGTCTA	4435	53.64268	2
CATACCA	5875	53.590122	13
GCGCGGT	9915	53.460094	9
GCGTCTA	875	53.196213	2
GGCCATA	6075	51.488422	10
CCGAACT	1590	50.383408	67
TACCACC	6300	49.856236	15
TGGCGCG	10725	49.796154	15
GCCGGTT	1610	49.682537	3
CGCGGTG	10765	49.623337	10
CGGTTCA	1645	49.044647	5
ATACCAC	6680	47.33124	14