EGAF00005318524 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318524
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4825832
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	25715	0.5328614837814495	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10813	0.2240649902441693	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACGACTTTCTGATAGGCAGCC	9814	0.2033638966296382	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	8995	0.18639272979250002	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8302	0.17203251169953698	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	6839	0.1417164957255039	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	6816	0.1412398939706148	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6385	0.13230879152030156	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	6231	0.12911763194408757	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	6129	0.12700400677023155	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	5965	0.1236056290397179	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	5164	0.10700745488031908	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5151	0.10673807127972959	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2630	44.293835	70
CGCGGCA	7770	37.813473	32
GCGGCAC	8045	36.70388	33
CGGCACC	8315	35.439404	34
GTTCCGT	540	35.199997	1
TCGCCGG	7940	34.4534	48
CCCGTCG	7900	34.426716	44
CCGTCGC	7950	34.396572	45
GCACCCC	9000	32.92223	36
ACCCGCG	9075	32.37092	25
CCCCCGA	9175	32.27785	19
CACCCCC	9255	32.031513	37
ATGGCCG	2915	31.495657	69
GGCACCC	9480	31.170706	35
TAGTCCG	445	30.232927	6
CCCCGAC	9965	29.690783	20
AGGACCG	690	29.234652	70
CCAGCGT	2680	27.47294	70
AGTCCGC	10785	27.41172	7
CGTCGCC	10090	27.253448	46