EGAF00005318525 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318525
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4825832
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	24814	0.5141911280790545	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	19310	0.4001382559525487	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	17392	0.36039381395788334	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	13578	0.2813608099080117	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9267	0.19202906358944943	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	7641	0.1583353917003327	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7260	0.15044038002151752	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6377	0.13214301699686187	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5210	63.216015	4
TCTACGG	5215	63.09124	5
TACGGCC	5275	62.373608	7
CTACGGC	5440	60.735355	6
ACGGCCA	5750	57.101044	8
GCGTCTA	1130	56.15661	2
GCCATAC	5835	55.97313	11
CGGCCAT	5870	55.93315	9
GCGCGGT	9775	54.228493	9
CCATACC	6050	53.868877	12
GGCCATA	6230	52.867138	10
CATACCA	6165	52.864017	13
GGGTCTA	4495	52.63273	2
CGTCTAC	1370	52.108818	3
TACCACC	6430	50.7395	15
TGGCGCG	10520	49.99425	15
CGCGGTG	10695	49.628174	10
CCGAACT	1515	48.63394	67
CGGTTCA	1555	48.350513	5
CGGTCTA	730	47.715553	2