EGAF00005318535 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318535
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3004133
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14779	0.49195558252580696	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	13823	0.4601327571049617	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9581	0.31892729116853347	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8467	0.2818450448099335	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4752	0.15818207782411764	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4628	0.15405443101220884	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4187	0.13937465485050096	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2970	61.81497	4
TCTACGG	2970	61.81497	5
TACGGCC	2995	60.502342	7
CTACGGC	3095	59.09871	6
ACGGCCA	3265	55.707344	8
CGGCCAT	3270	55.41423	9
GCCATAC	3300	54.605965	11
GCGCGGT	5160	52.774563	9
GGGTCTA	2555	52.039925	2
CATACCA	3500	51.97134	13
CGTCTAC	705	51.607067	3
GCGTCTA	640	51.008446	2
CCTGGTT	5105	50.711884	70
CCATACC	3585	50.549423	12
GGCCATA	3610	50.385197	10
TGGCGCG	5510	49.61153	15
GGTCTAC	3015	49.397083	3
TACCACC	3795	48.110588	15
CCGAACT	785	47.881847	67
CGCGGTG	5740	47.68045	10