EGAF00005318539 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318539
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3090602
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14907	0.48233321534121826	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	14046	0.4544745651494434	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10230	0.3310034744040158	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8761	0.2834722814519631	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5047	0.16330151860381892	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4932	0.15958056068041113	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4161	0.13463396451565102	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3080	63.37299	4
TACGGCC	3085	62.511898	7
TCTACGG	3120	62.451523	5
CTACGGC	3220	60.409374	6
ACGGCCA	3360	57.496826	8
CGGCCAT	3425	55.90912	9
GCCATAC	3440	55.764194	11
CATACCA	3670	52.362114	13
GCGTCTA	780	52.31626	2
GCGCGGT	5150	51.7778	9
CCATACC	3770	51.06342	12
GGGTCTA	2605	51.04099	2
CGTCTAC	920	50.637905	3
CCTGGTT	5460	50.512337	70
GGCCATA	3860	50.049046	10
TACCACC	3875	49.493755	15
GGTCTAC	3050	49.390892	3
CCGAACT	855	49.080708	67
TGGCGCG	5505	48.799202	15
CGGTTCA	830	47.115383	5